22–26 Sept 2025
University of Nova Gorica
Europe/Ljubljana timezone

Nanobodies in Advanced Flourescent Microscopy

26 Sept 2025, 11:00
1h 30m
University of Nova Gorica

University of Nova Gorica

Vipavska cesta 13 5000 Nova Gorica
Lecture Structural and Imaging Applications

Speaker

Dr Barbora Kalouskova (TU Wien, Austria)

Description

Advanced microscopy techniques are continually redefining how we study biological systems, offering unprecedented spatial and temporal resolution. In super-resolution fluorescence microscopy, spatial resolution can reach the scale of tens of nanometers. However, as optical resolution improves, molecular labeling is increasingly becoming the limiting factor.
In this talk, we will focus on how nanobodies, small, monovalent, single-domain antibody fragments, can overcome key limitations of conventional labeling approaches such as fluorescent proteins and standard antibodies. Their compact size (~15 kDa) minimizes linkage error, while their monovalency prevents artificial clustering or crosslinking of target molecules, an essential feature for quantitative imaging and live-cell compatibility.
Nanobodies can be efficiently expressed in E. coli and customized with labeling tags, allowing for functionalization (organic dyes, click chemistry groups). This enables detailed biophysical characterization, including the determination of binding kinetics or saturation concentration, which are critical for developing robust, reproducible labeling protocols.
Finally, we will highlight validated, ready-to-use nanobody systems such as anti-GFP and anti-ALFA-tag binders, which offer plug-and-play solutions without the need for custom nanobody generation.

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